Insertion junction: CLIP2.079074_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079074
Chromosome:chromosome 1
Location:7836952
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g055400 (1 of 1) PF05022 - SRP40, C-terminal domain (SRP40_C) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCCAGTAACACCTCAAAGAGGCCAAGGCACGCCCTCCCAAACGCAGC
Internal bar code:GGTGATAGGAGCTGAGTCCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:654
LEAP-Seq percent confirming:26.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAAATGAGTGTGGCGAG
Suggested primer 2:GAAGGCCACGTTGCACAATT