Insertion junction: CLIP2.079077_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079077
Chromosome:chromosome 2
Location:1156985
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g081150 TET3 (1 of 12) PF12851 - Oxygenase domain of the 2OGFeDO superfamily (Tet_JBP); non-canonical TET-dioxygenase, putative 5-methylcytosine-modifying enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTTGCGTCTGCGAGCGGCGGTGTGGCCTGCCAGCCGCCGGGCACGCC
Internal bar code:GCAGGCTATAGCAGTTGTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:342
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCACCATCCTCTGTGTCC
Suggested primer 2:AGGAGCAGGTGGATTGTGTG