Insertion junction: CLIP2.079080_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.079080
Chromosome:chromosome 7
Location:5548258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351750 (1 of 1) K14823 - rRNA-processing protein EBP2 (EBP2, EBNA1BP2) 3'UTR
Cre07.g800853 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAATGGCGCTAGGCGTCCTAAGGAAGCTTCCACGAGGTTTCAATGCTT
Internal bar code:CCTCTCGCTTGAAACAAACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1405
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCGCCTGAACACCTCCTC
Suggested primer 2:TTAACCAGTGCCCGAGGAAC