Insertion junction: CLIP2.079084_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079084
Chromosome:chromosome 17
Location:3451505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723600 IFT81,FLA9 Intraflagellar Transport Protein 81; (1 of 1) IPR029600 - Intraflagellar transport protein 81 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCTGCTTCGTCCAGACAAGTGTCTGCCTCTGGCCCGCGCCCAAACAG
Internal bar code:AGGATGCCTCCTTCATTGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATCGAAGGGAGACGACG
Suggested primer 2:AGTCCTTAAAGTCTGCCGGC