Insertion junction: CLIP2.079086_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.079086
Chromosome:plastome
Location:187538
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802331 2716963,ChreCp066,psbC (1 of 1) K02705 - photosystem II CP43 chlorophyll apoprotein (psbC); photosystem II 43 kDa protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCTACAAATCCAACCGTCACCACCAAATGGAGATTTTACAAGGTAAC
Internal bar code:TGGTAGACACGTCAGAGGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:291
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCGTGACCAAGAAACAAC
Suggested primer 2:TTTTCGAAACCAGCAGCAGC