Insertion junction: CLIP2.079087_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079087
Chromosome:chromosome 16
Location:6592365
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g673950 (1 of 1) 2.6.1.80 - Nicotianamine aminotransferase / Nicotianamine transaminase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAATAATGCAATCTGCGCGCGTTAGCGCCACCCAACGTGCCTCCAGCC
Internal bar code:ACTGAGTGACTTGCTGTGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3671
LEAP-Seq percent confirming:31.5789
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCGTGCTAGGTTGACAT
Suggested primer 2:CTGGTGAACAAAGCGGTTGG