Insertion junction: CLIP2.079088_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.079088
Chromosome:chromosome 1
Location:7174078
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051450 (1 of 2) PF13867 - Sin3 binding region of histone deacetylase complex subunit SAP30 (SAP30_Sin3_bdg) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATGCAGCAGTCAGTCATCGACGCTTGGCGGCTTGGTGCACAATAGT
Internal bar code:CTTGCCGAGCTGACGTCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1191
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTATTGCGCCTGGATTG
Suggested primer 2:TGGCGGAACAATGAGAAGCT