Insertion junction: CLIP2.079099_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079099
Chromosome:chromosome 16
Location:5218512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684550 HAR2 Possible 3-hydroxyacid dehydrogenase; (1 of 3) 1.1.1.26 - Glyoxylate reductase / NADH-dependent glyoxylate reductase 5'UTR
Cre16.g684600 SEC5 (1 of 1) K17637 - exocyst complex component 2 (EXOC2, SEC5); Component of the Exocyst Complex 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTGGGATGGAAGCTCGCCCCTAGCTGCTTATCAAGCTGCTGGAAGAT
Internal bar code:TGCACGTAACCCCTAACAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1470
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGCAGCTGGAAAGCTAC
Suggested primer 2:CTTACCTACCGATCGTGCCC