Insertion junction: CLIP2.079107_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079107
Chromosome:chromosome 6
Location:62991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249150 MAPKK1 Mitogen-Activated Protein Kinase Kinase 1; (1 of 1) PTHR24361//PTHR24361:SF408 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SERINE/THREONINE-PROTEIN KINASE STE7 5'UTR
Cre06.g249300 ARP5,ARP4 (1 of 1) K11340 - actin-like protein 6A (ACTL6A, INO80K); Actin-related protein, putative SWR-C component 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAGAAACACGATCATGCGACTGCACCGCGCCCATTTCGGCATTTGGCA
Internal bar code:TTTATCCCCCACACCGGAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1511
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAAGCCACTCACGATGCT
Suggested primer 2:TCCTCACCTCCATCCCGATT