Insertion junction: CLIP2.079107_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.079107
Chromosome:chromosome 6
Location:62999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249150 MAPKK1 Mitogen-Activated Protein Kinase Kinase 1; (1 of 1) PTHR24361//PTHR24361:SF408 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SERINE/THREONINE-PROTEIN KINASE STE7 5'UTR
Cre06.g249300 ARP5,ARP4 (1 of 1) K11340 - actin-like protein 6A (ACTL6A, INO80K); Actin-related protein, putative SWR-C component 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTTGCGCAGCTTGTATTTACCGCTTTTCGCTGCCTCCACATACAGTA
Internal bar code:GTCTATGGGAGCCTAGCGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:307
LEAP-Seq percent confirming:1.36986
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:72
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCACCTCCATCCCGATT
Suggested primer 2:TCAAAGCCACTCACGATGCT