Insertion junction: CLIP2.079111_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.079111
Chromosome:chromosome 10
Location:5691018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459300 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTTTGTCATGATTTTAACAGGCAGAGGACTGGAGTTCCATTGGGCTG
Internal bar code:GCCAATCAATGCTCTGGTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:625
LEAP-Seq percent confirming:29.6296
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAGACAATCAGTGCCAT
Suggested primer 2:GCTTGTCGTCTACCCACCTC