Insertion junction: CLIP2.079114_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079114
Chromosome:chromosome 9
Location:93634
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g386400 FAP124,UBA1,POC20 (1 of 1) K03178 - ubiquitin-activating enzyme E1 (UBE1, UBA1); Ubiquitin E1 activating enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAACTCACAGCCCAGCGCGCCAGCACCCACCTGCAGGGGAGGAGGCAG
Internal bar code:GTTGCATTCCATCGCCTGCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTTAAGGCTCACCCATG
Suggested primer 2:CACACACTCCTCAATCCCCC