Insertion junction: CLIP2.079117_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079117
Chromosome:chromosome 16
Location:1138282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649950 HFO24,HFO40 (1 of 33) K11254 - histone H4 (H4); Histone H4 gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAATCGTGTGTCGCCGTGTGTCGCCTGGGGAGCGCTGTTACGTCCCG
Internal bar code:CTGTGTCCGAGACGTAATCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1712
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGAAGACGTTCCTGGA
Suggested primer 2:GATGGGGTTGGAGTCCAGTG