Insertion junction: CLIP2.079121_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.079121
Chromosome:chromosome 16
Location:3221133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTAGTTGGCAGGCCGTCAAGAGCCCTGACAAAAGGGCCACTGAGATG
Internal bar code:TAATTTGAGTTTCTGGACTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3336
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCCTCAGTGCTCCATTT
Suggested primer 2:CGGAATCGCTGAATCGAGGA