Insertion junction: CLIP2.079122_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079122
Chromosome:chromosome 3
Location:7642306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204300 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGACGGATGTGTGGCGTGGTGTACGGACGGGAGTGGCTGTGGCCCTTA
Internal bar code:GCATTGCAGCCTGCACCGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:454
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTATCGTGTCTGGAGCC
Suggested primer 2:CAACGACGACTCCCTGACAA