Insertion junction: CLIP2.079122_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079122
Chromosome:chromosome 3
Location:7642308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204300 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAACAGCCTCACGAGGCCGCACACCTACCGCCCCCATCACGCGCACCC
Internal bar code:GCATTGCAGCCTGCACCGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGACGACTCCCTGACAA
Suggested primer 2:CTCGTATCGTGTCTGGAGCC