Insertion junction: CLIP2.079124_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.079124
Chromosome:chromosome 9
Location:5333834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407600 TEN1 Conserved TenA familiy member; (1 of 1) PTHR20858//PTHR20858:SF18 - PHOSPHOMETHYLPYRIMIDINE KINASE // PROTEIN PET18 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAAATTTGCCTAGTGTAGAAACCAGCAACAGCCCTTGATTGGCCACTG
Internal bar code:TAGTATGTTTGCGTTTCTAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1073
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTACCTCACCTGTGCAAC
Suggested primer 2:GTTGTCAAGAACACGGGCAC