Insertion junction: CLIP2.079124_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079124
Chromosome:chromosome 9
Location:5333873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407600 TEN1 Conserved TenA familiy member; (1 of 1) PTHR20858//PTHR20858:SF18 - PHOSPHOMETHYLPYRIMIDINE KINASE // PROTEIN PET18 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATGTGATGGCGGCATCGAAGAGCATGTGGTTACGTGGGGGCGCTTGT
Internal bar code:TTCCAGCAGAAGTGAATGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1228
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTCAAGAACACGGGCAC
Suggested primer 2:TCGTACCTCACCTGTGCAAC