Insertion junction: CLIP2.079133_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079133
Chromosome:chromosome 3
Location:3382867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166500 (1 of 2) IPR000104//IPR013083 - Antifreeze protein, type I // Zinc finger, RING/FYVE/PHD-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGCTTGTCTTGGGGCGTGTCAGTACGTAAGGAGCCGGTAGCTGCAGT
Internal bar code:GTTATATAGTTTCCTTCTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3211
LEAP-Seq percent confirming:92.7536
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGCCAAAACCTTCACCA
Suggested primer 2:CAGCGGCTGAAGTAGAAGGG