Insertion junction: CLIP2.079145_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079145
Chromosome:chromosome 3
Location:6524358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800364 (1 of 3) PTHR23257:SF518 - DUAL SPECIFICITY PROTEIN KINASE SHKD 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTGGGTTAGAAACTTTGTTGCTGGTGCCGCCGGTGCGGACACTGCCG
Internal bar code:TGCACGGCTCTTCCAGCGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3592
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACGTAGCTCTGGATCTC
Suggested primer 2:TGAGGTTGACGTCCGTTCTG