Insertion junction: CLIP2.079146_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.079146
Chromosome:chromosome 14
Location:466485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610850 3'UTR
Cre14.g610900 (1 of 1) IPR026205 - Progesterone-induced-blocking factor 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTATGAGCTTATGACGGCGGTACGTACCGTACCAGCGGAGAGACTACA
Internal bar code:CGATTCGGTGGGCAGGGATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:547
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTAGAGGTCATACCGTGG
Suggested primer 2:TCAACGAGTTCACGGGTGAG