Insertion junction: CLIP2.079147_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.079147
Chromosome:chromosome 1
Location:2907856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018100 (1 of 1) 3.1.3.16//3.1.3.27//3.1.3.48 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase // Phosphatidylglycerophosphatase // Protein-tyrosine-phosphatase / PTPase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGGTTTGGTGTAGCTGAGCACACAACGACCGCCACACGCTGTGGGCC
Internal bar code:TATGTGAGTTCGAGACCGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1559
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCTTGCACCCACGTTAT
Suggested primer 2:CTACGTCAGAGCGTTGGGTT