Insertion junction: CLIP2.079156_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079156
Chromosome:chromosome 9
Location:4522420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400960 (1 of 1) IPR006311//IPR007657 - Twin-arginine translocation pathway, signal sequence // Glycosyltransferase AER61, uncharacterised 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATGCATTGTCGTGTTGCTGCCTTGCTGCATTCCTATGTATGTGTTTA
Internal bar code:AGGGCAGTATTGCCGGGATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2424
LEAP-Seq percent confirming:87.8788
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGCGTTGTGGTAGAGCT
Suggested primer 2:CCCGACTCAGGAAAAGGCAT