Insertion junction: CLIP2.079157_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079157
Chromosome:chromosome 11
Location:857821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467647 (1 of 1) K12179 - COP9 signalosome complex subunit 6 (COPS6, CSN6) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCAATAACACGAGGAAAGCCCTCGCATATTAACGAAACCAGCCAGGA
Internal bar code:GAGCATGAGGTCGGAACCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1091
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACCCCATACACATGCAA
Suggested primer 2:CGATTTGGGTCTGTGTGGGA