Insertion junction: CLIP2.079157_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079157
Chromosome:chromosome 11
Location:858449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467647 (1 of 1) K12179 - COP9 signalosome complex subunit 6 (COPS6, CSN6) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCAGTTTCCACGCTTGCCGCCATCGCGAATCGGTCGATATGCATTC
Internal bar code:GAGCATGAGGTCGGAACCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1077
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGATTTGGGTCTGTGTGGGA
Suggested primer 2:AGCACCCCATACACATGCAA