Insertion junction: CLIP2.079165_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.079165
Chromosome:chromosome 7
Location:5524808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351500 (1 of 1) K15078 - structure-specific endonuclease subunit SLX1 (SLX1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGAGACGGAGAACGTATTGCCAGCCCTTGGGAAGGCGTGACAGTGGGG
Internal bar code:GTCTTCATGGTGATGGTTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:821
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCACTGAACAACTGGGT
Suggested primer 2:TCATACTCTGCCGGGACTCA