Insertion junction: CLIP2.079165_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079165
Chromosome:chromosome 7
Location:5524810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351500 (1 of 1) K15078 - structure-specific endonuclease subunit SLX1 (SLX1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTACAATTATTCGCAGTCTGTGACGTGACTGCACTGACGGGTCTTTAAC
Internal bar code:GTCTTCATGGTGATGGTTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1171
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCATACTCTGCCGGGACTCA
Suggested primer 2:TGTGCACTGAACAACTGGGT