Insertion junction: CLIP2.079169_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.079169
Chromosome:chromosome 6
Location:6348616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293100 (1 of 2) PTHR19957:SF124 - SYNTAXIN-8B-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGACTCAAGATAACAAAGTCATCTCATACTTTGAAGGGCACAGACTGG
Internal bar code:ACCAGGTAGATATTCTTTAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3325
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGGTAGTCAGTGTCAC
Suggested primer 2:TTCCCGTAATATGACGCCGG