Insertion junction: CLIP2.079177_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079177
Chromosome:chromosome 16
Location:2368878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659400 (1 of 1) PTHR23257:SF347 - SERINE/THREONINE-PROTEIN KINASE KINX-RELATED 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCAGCCACCAGCGCCGGCCCGTCAGTTCCACACACGGCGTTGCCCGAT
Internal bar code:AACCACGCTAAATCACTCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:4339
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCTGGTGAGCGTGTTGT
Suggested primer 2:GCCATTGCCATGCTTACGAG