Insertion junction: CLIP2.079190_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079190
Chromosome:chromosome 6
Location:5858476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289400 PDE11 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATATACTAATACGTAGCAGGCGTGTGAAAAACACAAACCCGAGACAC
Internal bar code:TCTCTCACAATCGGAAAAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2114
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGTATCCTCCCTTGCTC
Suggested primer 2:TCGTTGCAGACTTTGACCGA