Insertion junction: CLIP2.079195_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.079195
Chromosome:chromosome 3
Location:906882
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g146567 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGCGGTAGACACTTCAACGCTTAGCCTGCCATCGGCGCAGCAGCAG
Internal bar code:GGTCAGGGACTAGTCGTTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:189
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGGAAATACAGGTTGCC
Suggested primer 2:ACTAGGGCTAGTGAGGGACG