Insertion junction: CLIP2.079196_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079196
Chromosome:plastome
Location:161059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802323 2717034,atpB,ChreCp058 (1 of 1) K02112 - F-type H+-transporting ATPase subunit beta (ATPF1B, atpD); ATPase beta chain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTAGAATTTATATATAAAAAGTATTATTCACTAACGCTTATTTTTTAG
Internal bar code:TTGTCATGCGTTTCCCTTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:83
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGAGACCTTCAAGCCGT
Suggested primer 2:TTTTGCCTACACCAGCACCA