Insertion junction: CLIP2.079202_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.079202
Chromosome:chromosome 14
Location:911117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613350 (1 of 1) K14016 - ubiquitin fusion degradation protein 1 (UFD1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTTGCAAAGGCGGGTACTGCGGCAGCGGGGTTGTGGGGGCTGCATCA
Internal bar code:ATTGACAGGGTCGGTAAAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:711
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAGGTTGATGTGTGTGC
Suggested primer 2:CCAATGCCTCACTAATGCGC