Insertion junction: CLIP2.079205_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079205
Chromosome:chromosome 3
Location:5928415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188800 Nicotinate phosphoribosyltransferase; (1 of 1) PTHR11098//PTHR11098:SF2 - NICOTINATE PHOSPHORIBOSYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGTGCAGCACGGCGCAGTTGCTGGCGCACACCGAGGACCGCGCGTTT
Internal bar code:TCATTAACTCCGCCCGGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1892
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGATGACTAGCGAGCGT
Suggested primer 2:CCATCACCGGCTTTTCTCCT