Insertion junction: CLIP2.079212_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079212
Chromosome:chromosome 16
Location:847883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g647700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCTCTCTAGCCCACCCTCTTGCACCTGCGGAACCGTGCTTAGTCCTC
Internal bar code:GGCGCGTCAGGGATGCAACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2985
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCATCGGCTGGTAGCTCG
Suggested primer 2:ACAAGCCCTAGTGTTGGGTG