Insertion junction: CLIP2.079215_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.079215
Chromosome:chromosome 6
Location:6270016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292450 PUS13 RNA pseudouridine synthase; (1 of 1) 5.4.99.44 - Mitochondrial tRNA pseudouridine(27/28) synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGATTTGGCGGAGTTATGCACTGAGGACACATGCCACACTGCCGTGT
Internal bar code:AGGTTTCTCTTGAATAAATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3099
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGTGAGCATGGCCGTTG
Suggested primer 2:TTCGGCTTCAGGTCTTGGTC