Insertion junction: CLIP2.079220_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079220
Chromosome:chromosome 2
Location:329540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075150 RPB2 (1 of 1) K03010 - DNA-directed RNA polymerase II subunit RPB2 (RPB2, POLR2B); DNA-directed RNA polymerase II, 135 kDa polypeptide 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTAGGTGTACTACATAGCAACTACCTACAGAGGACATAGATGTGCTG
Internal bar code:GTCACTTGATTGCGCGTCCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1206
LEAP-Seq percent confirming:61.0169
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTCGAAAAAGGCGGTA
Suggested primer 2:TCTTGGTTCTCATGGCACCC