Insertion junction: CLIP2.079228_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079228
Chromosome:chromosome 12
Location:5908410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533650 (1 of 1) PTHR13439//PTHR13439:SF0 - CT120 PROTEIN // BCDNA.GH12326 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTATTAAGTATACCGTATTCAAGGCAGCATATGCTCTGCATGGCCCCT
Internal bar code:GGCCGTTAAGGCATTGAGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2961
LEAP-Seq percent confirming:79.4118
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGGCGGCATAAGAATG
Suggested primer 2:GAATGGGCAGTTGTTTGCGT