Insertion junction: CLIP2.079231_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079231
Chromosome:chromosome 4
Location:3139785
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g226001 (1 of 1) IPR000104//IPR015943 - Antifreeze protein, type I // WD40/YVTN repeat-like-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCGGACCCCCCGCCGCCGCGGTCGCCGCCACCGCGTCCCCCATCGCC
Internal bar code:AATTGCCAAGGTTCTGAGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:467
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCACATCTTCCCCCACTC
Suggested primer 2:CGTTCCAGACTTCCAGTCCC