Insertion junction: CLIP2.079239_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079239
Chromosome:chromosome 6
Location:5229145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284000 (1 of 1) PTHR16019//PTHR16019:SF5 - SYNAPSE-ASSOCIATED PROTEIN // BSD DOMAIN-CONTAINING PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCATGCAGCACTTGCGCCTCGCTCGCGTGCCACGCAGCTACCACAATG
Internal bar code:ACCGCGCTCAGGAGTAAAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4563
LEAP-Seq percent confirming:87.7193
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCGCATAATTGGTGATG
Suggested primer 2:TACCCTGTGTTGAGCTGCTG