Insertion junction: CLIP2.079244_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079244
Chromosome:chromosome 12
Location:6164275
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535600 DNJ17 (1 of 62) PF00226 - DnaJ domain (DnaJ); DnaJ-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAGGGAATTCGACGTTTGGATCGCGCAAATGAAAGGAACACTCATAGC
Internal bar code:ATGTTCCCCTTCTTGGTGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1952
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCTCAGATCCGGCATCC
Suggested primer 2:AGCCTCATACACATCGCTCG