Insertion junction: CLIP2.079248_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.079248
Chromosome:plastome
Location:93690
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802304 2716990,ChreCp040,psbE cytochrome b559 alpha subunit; (1 of 1) K02707 - photosystem II cytochrome b559 subunit alpha (psbE) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTAAAAAATTATCTGGTAACTAATTAATCTAAAAACTTTTTTTACTTA
Internal bar code:GACGCCGTTAAATTTTGTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:55
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGACATCCGACACCCCTTTT
Suggested primer 2:AGCCTGCTTAGCTCAGTTGG