Insertion junction: CLIP2.079253_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079253
Chromosome:chromosome 3
Location:4442175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175500 (1 of 2) K05770 - benzodiazapine receptor (BZRP) 3'UTR
Cre03.g800331 5'UTR
lncRNA_TCONS_00070774 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGTAACATTCAGCGGCAGGATTAATAGCAATGCTTGACGACTCCATT
Internal bar code:GAATAGCGTATGAGTACTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:281
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCATTCATACCGTGCGG
Suggested primer 2:CCTCCAACTCACGGTACACC