Insertion junction: CLIP2.079267_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079267
Chromosome:chromosome 4
Location:112639
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g216650 (1 of 1) PF01947 - Protein of unknown function (DUF98) (DUF98) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCTCTGACGCCCCTCCCCTCCTCCCTTCCCCCTGCAGGAGTGTCTG
Internal bar code:AACCTGGATGGATCCATCACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAACGCTTCATGTTCCGC
Suggested primer 2:AGGGTTGTTGTTGTGTGGGT