Insertion junction: CLIP2.079270_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079270
Chromosome:chromosome 5
Location:1082873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247900 (1 of 13) PF00646 - F-box domain (F-box) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGGTTGTTATGAAGGAGGTTGTTAAGCGGCGGCTGCCGGTTGGTTG
Internal bar code:GGATCTCTTGCTGATGTTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2013
LEAP-Seq percent confirming:83.0189
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCGCTGTTGGCTTGACT
Suggested primer 2:GCATGTGTCTGGAGCTCTGT