Insertion junction: CLIP2.079277_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079277
Chromosome:chromosome 1
Location:4996342
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g034650 (1 of 1) K03352 - anaphase-promoting complex subunit 5 (APC5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGTGCGGCAAGCTGCGACAGCGCCTGGGGCAGCTGGGGTCGGCCATT
Internal bar code:TGACAGCCACGATACACACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:758
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGGATGTCGAACAGCTT
Suggested primer 2:TCAGTCTCTACCGTACCGCA