Insertion junction: CLIP2.079278_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079278
Chromosome:chromosome 17
Location:5030042
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g736000 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGATGCATGAACATACCATACGCCCCATGCCCTATGCCCCAGGTCTGA
Internal bar code:GCAGCGCCTTGGCAGGTATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3433
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACGGTATCGGCATCAGA
Suggested primer 2:CATCGCTACCATGCAAGTGC