Insertion junction: CLIP2.079282_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079282
Chromosome:chromosome 6
Location:5090152
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g282600 HEL27 (1 of 1) K14809 - ATP-dependent RNA helicase DDX55/SPB4 [EC:3.6.4.13] (DDX55, SPB4); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGTTGTGTGCCCTAGTGCCAAACGTTAGCACACAGGTCCACTTACAC
Internal bar code:GAGACGCTGCTTGGTTTAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:119
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCAACCCCTCATATTTG
Suggested primer 2:TTGAGAATGCCGCAGACAGT