Insertion junction: CLIP2.079296_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079296
Chromosome:chromosome 1
Location:7023769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800128 (1 of 4) PTHR11229:SF5 - 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACACGCCCCTCCGTAACCCCCTCCACGAACCGCTAGCAGTGGCAGCGC
Internal bar code:TATTGCACATATCGTGGTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1888
LEAP-Seq percent confirming:37.8378
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAAAGTGGGGTAGTGGC
Suggested primer 2:CTAGGCCGACTGCTAACGAG