Insertion junction: CLIP2.079297_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.079297
Chromosome:chromosome 8
Location:3364003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377650 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTATAGAGAGGTGTGTGTGGAGCGAACGGAGGCCTTGAGGCAGGAGCG
Internal bar code:GTGGGTATCCTCTTTATTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGGCGTGTATGGAAGAA
Suggested primer 2:ATCTGCACTACTTTGCCCCC